Line data    Source code

       1             : //#  CASA - Common Astronomy Software Applications (http://casa.nrao.edu/)
       2             : //#  Copyright (C) Associated Universities, Inc. Washington DC, USA 2011, All
       3             : //# rights reserved.
       4             : //#  Copyright (C) European Southern Observatory, 2011, All rights reserved.
       5             : //#
       6             : //#  This library is free software; you can redistribute it and/or
       7             : //#  modify it under the terms of the GNU Lesser General Public
       8             : //#  License as published by the Free software Foundation; either
       9             : //#  version 2.1 of the License, or (at your option) any later version.
      10             : //#
      11             : //#  This library is distributed in the hope that it will be useful,
      12             : //#  but WITHOUT ANY WARRANTY, without even the implied warranty of
      13             : //#  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
      14             : //#  Lesser General Public License for more details.
      15             : //#
      16             : //#  You should have received a copy of the GNU Lesser General Public
      17             : //#  License along with this library; if not, write to the Free Software
      18             : //#  Foundation, Inc., 59 Temple Place, Suite 330, Boston,
      19             : //#  MA 02111-1307  USA
      20             : 
      21             : #include <mstransform/TVI/StatWtDataAggregator.h>
      22             : 
      23             : #include <casacore/casa/Arrays/ArrayMath.h>
      24             : #include <casacore/casa/Arrays/Cube.h>
      25             : // debug
      26             : #include <casacore/casa/IO/ArrayIO.h>
      27             : 
      28             : #ifdef _OPENMP
      29             : #include <omp.h>
      30             : #endif
      31             : 
      32             : using namespace casacore;
      33             : using namespace std;
      34             : 
      35             : namespace casa {
      36             : 
      37             : namespace vi {
      38             : 
      39           0 : StatWtDataAggregator::StatWtDataAggregator(
      40             :     ViImplementation2 *const vii,
      41             :     const map<Int, vector<StatWtTypes::ChanBin>>& chanBins,
      42             :     std::shared_ptr<map<uInt, pair<uInt, uInt>>>& samples,
      43             :     StatWtTypes::Column column, Bool noModel,
      44             :     const map<uInt, Cube<Bool>>& chanSelFlags,
      45             :     std::shared_ptr<
      46             :         casacore::ClassicalStatistics<casacore::Double,
      47             :         casacore::Array<casacore::Float>::const_iterator,
      48             :         casacore::Array<casacore::Bool>::const_iterator>
      49             :     >& wtStats,
      50             :     shared_ptr<const pair<Double, Double>> wtrange,
      51             :     Bool combineCorr,
      52             :     shared_ptr<
      53             :         StatisticsAlgorithm<
      54             :             Double, Array<Float>::const_iterator,
      55             :             Array<Bool>::const_iterator, Array<Double>::const_iterator
      56             :         >
      57             :     >& statAlg, Int minSamp
      58           0 : ) : _vii(vii), _chanBins(chanBins), _samples(samples),
      59             :     _varianceComputer(
      60           0 :         new StatWtVarianceAndWeightCalculator(statAlg, samples, minSamp)
      61             :     ),
      62             :     _column(column),_noModel(noModel), _chanSelFlags(chanSelFlags),
      63           0 :     _wtStats(wtStats), _wtrange(wtrange), _combineCorr(combineCorr) {}
      64             : 
      65             : 
      66           0 : StatWtDataAggregator::~StatWtDataAggregator() {}
      67             : 
      68           0 : Bool StatWtDataAggregator::mustComputeWtSp() const {
      69           0 :     return *_mustComputeWtSp;
      70             : }
      71             : 
      72           0 : void StatWtDataAggregator::setMustComputeWtSp(
      73             :     std::shared_ptr<casacore::Bool> mcwp
      74             : ) {
      75           0 :     _mustComputeWtSp = mcwp;
      76           0 : }
      77             : 
      78           0 : StatWtTypes::Baseline StatWtDataAggregator::_baseline(
      79             :     uInt ant1, uInt ant2
      80             : ) {
      81           0 :     return StatWtTypes::Baseline(min(ant1, ant2), max(ant1, ant2));
      82             : }
      83             : 
      84           0 : Bool StatWtDataAggregator::_checkFirstSubChunk(
      85             :     Int& spw, Bool& firstTime, const VisBuffer2 * const vb
      86             : ) const {
      87           0 :     if (! firstTime) {
      88             :         // this chunk has already been checked, it has not
      89             :         // been processed previously
      90           0 :         return False;
      91             :     }
      92           0 :     const auto& rowIDs = vb->rowIds();
      93           0 :     if (_processedRowIDs.find(rowIDs[0]) == _processedRowIDs.end()) {
      94             :         // haven't processed this chunk
      95           0 :         _processedRowIDs.insert(rowIDs[0]);
      96             :         // the spw is the same for all subchunks, so it only needs to
      97             :         // be set once
      98           0 :         spw = *vb->spectralWindows().begin();
      99           0 :         if (_samples->find(spw) == _samples->end()) {
     100           0 :             (*_samples)[spw].first = 0;
     101           0 :             (*_samples)[spw].second = 0;
     102             :         }
     103           0 :         firstTime = False;
     104           0 :         return False;
     105             :     }
     106             :     else {
     107             :         // this chunk has been processed, this can happen at the end
     108             :         // when the last chunk is processed twice
     109           0 :         return True;
     110             :     }
     111             : }
     112             : 
     113           0 : const Cube<Complex> StatWtDataAggregator::_dataCube(
     114             :     const VisBuffer2 *const vb
     115             : ) const {
     116           0 :     switch (_column) {
     117           0 :     case StatWtTypes::CORRECTED:
     118           0 :         return vb->visCubeCorrected();
     119           0 :     case StatWtTypes::DATA:
     120           0 :         return vb->visCube();
     121           0 :     case StatWtTypes::RESIDUAL:
     122           0 :         if (_noModel) {
     123           0 :             return vb->visCubeCorrected();
     124             :         }
     125             :         else {
     126           0 :             return vb->visCubeCorrected() - vb->visCubeModel();
     127             :         }
     128           0 :     case StatWtTypes::RESIDUAL_DATA:
     129           0 :         if(_noModel) {
     130           0 :             return vb->visCube();
     131             :         }
     132             :         else {
     133           0 :             return vb->visCube() - vb->visCubeModel();
     134             :         }
     135           0 :     default:
     136           0 :         ThrowCc("Logic error: column type not handled");
     137             :     }
     138             : }
     139             : 
     140           0 : Cube<Bool> StatWtDataAggregator::_getResultantFlags(
     141             :     Cube<Bool>& chanSelFlagTemplate, Cube<Bool>& chanSelFlags,
     142             :     Bool& initTemplate, Int spw, const Cube<Bool>& flagCube
     143             : ) const {
     144           0 :     if (_chanSelFlags.find(spw) == _chanSelFlags.cend()) {
     145             :         // no selection of channels to ignore
     146           0 :         return flagCube;
     147             :     }
     148           0 :     if (initTemplate) {
     149             :         // this can be done just once per chunk because all the rows
     150             :         // in the chunk are guaranteed to have the same spw
     151             :         // because each subchunk is guaranteed to have a single
     152             :         // data description ID.
     153           0 :         chanSelFlagTemplate = _chanSelFlags.find(spw)->second;
     154           0 :         initTemplate = False;
     155             :     }
     156           0 :     auto dataShape = flagCube.shape();
     157           0 :     chanSelFlags.resize(dataShape, False);
     158           0 :     auto ncorr = dataShape[0];
     159           0 :     auto nrows = dataShape[2];
     160           0 :     IPosition start(3, 0);
     161           0 :     IPosition end = dataShape - 1;
     162           0 :     Slicer sl(start, end, Slicer::endIsLast);
     163           0 :     for (uInt corr=0; corr<ncorr; ++corr) {
     164           0 :         start[0] = corr;
     165           0 :         end[0] = corr;
     166           0 :         for (Int row=0; row<nrows; ++row) {
     167           0 :             start[2] = row;
     168           0 :             end[2] = row;
     169           0 :             sl.setStart(start);
     170           0 :             sl.setEnd(end);
     171           0 :             chanSelFlags(sl) = chanSelFlagTemplate;
     172             :         }
     173             :     }
     174           0 :     return flagCube || chanSelFlags;
     175             : }
     176             : 
     177           0 : void StatWtDataAggregator::_updateWtSpFlags(
     178             :     Cube<Float>& wtsp, Cube<Bool>& flags, Bool& checkFlags,
     179             :     const Slicer& slice, Float wt
     180             : ) const {
     181             :     // writable array reference
     182           0 :     auto flagSlice = flags(slice);
     183           0 :     if (*_mustComputeWtSp) {
     184             :         // writable array reference
     185           0 :         auto wtSlice = wtsp(slice);
     186           0 :         wtSlice = wt;
     187             :         // update global stats before we potentially flag data
     188           0 :         auto mask = ! flagSlice;
     189           0 :         _wtStats->addData(wtSlice.begin(), mask.begin(), wtSlice.size());
     190             :     }
     191           0 :     else if (! allTrue(flagSlice)) {
     192             :         // we don't need to compute WEIGHT_SPECTRUM, and the slice isn't
     193             :         // entirely flagged, so we need to update the WEIGHT column stats
     194           0 :         _wtStats->addData(Array<Float>(IPosition(1, 1), wt).begin(), 1);
     195             :     }
     196           0 :     if (
     197           0 :         wt == 0
     198           0 :         || (_wtrange && (wt < _wtrange->first || wt > _wtrange->second))
     199             :     ) {
     200           0 :         if (*_mustComputeWtSp) {
     201           0 :             wtsp(slice) = 0;
     202             :         }
     203           0 :         checkFlags = True;
     204           0 :         flagSlice = True;
     205             :     }
     206             : 
     207           0 : }
     208             : 
     209             : }
     210             : 
     211             : }