Line data    Source code

       1             : //# RFASpectralRej.h: this defines RFASpectralRej
       2             : //# Copyright (C) 2000,2001,2002
       3             : //# Associated Universities, Inc. Washington DC, USA.
       4             : //#
       5             : //# This library is free software; you can redistribute it and/or modify it
       6             : //# under the terms of the GNU Library General Public License as published by
       7             : //# the Free Software Foundation; either version 2 of the License, or (at your
       8             : //# option) any later version.
       9             : //#
      10             : //# This library is distributed in the hope that it will be useful, but WITHOUT
      11             : //# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
      12             : //# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
      13             : //# License for more details.
      14             : //#
      15             : //# You should have received a copy of the GNU Library General Public License
      16             : //# along with this library; if not, write to the Free Software Foundation,
      17             : //# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
      18             : //#
      19             : //# Correspondence concerning AIPS++ should be addressed as follows:
      20             : //#        Internet email: aips2-request@nrao.edu.
      21             : //#        Postal address: AIPS++ Project Office
      22             : //#                        National Radio Astronomy Observatory
      23             : //#                        520 Edgemont Road
      24             : //#                        Charlottesville, VA 22903-2475 USA
      25             : //#
      26             : //# $Id$
      27             : #ifndef FLAGGING_RFASPECTRALREJ_H
      28             : #define FLAGGING_RFASPECTRALREJ_H
      29             : 
      30             : #include <flagging/Flagging/RFAFlagCubeBase.h> 
      31             : #include <flagging/Flagging/RFDataMapper.h> 
      32             : #include <flagging/Flagging/RFFlagCube.h> 
      33             : #include <flagging/Flagging/RFRowClipper.h> 
      34             : #include <casacore/scimath/Functionals/Polynomial.h>
      35             : #include <casacore/scimath/Fitting/LinearFit.h>
      36             : #include <casacore/casa/Arrays/LogiVector.h>
      37             :     
      38             : namespace casa { //# NAMESPACE CASA - BEGIN
      39             : 
      40             : // <summary>
      41             : // RFASpectralRej: Spectral rejection agent
      42             : // </summary>
      43             : 
      44             : // <use visibility=local>
      45             : 
      46             : // <reviewed reviewer="" date="" tests="" demos="">
      47             : // </reviewed>
      48             : 
      49             : // <prerequisite>
      50             : //   <li> RFDataMapper
      51             : //   <li> RFFlagCubeBase
      52             : //   <li> RFRowClipper
      53             : // </prerequisite>
      54             : //
      55             : // <synopsis>
      56             : // RFASpectralRej fits a polynomial to a specified segment of the spectrum 
      57             : // (presumably, spectral line-free). The fit produces a noise estimate for
      58             : // each row. Rows with excessive noise levels are flagged using RFRowClipper.
      59             : // </synopsis>
      60             : //
      61             : // <todo asof="2001/04/16">
      62             : //   <li> add this feature
      63             : //   <li> fix this bug
      64             : //   <li> start discussion of this possible extension
      65             : // </todo>
      66             : 
      67             : class RFASpectralRej : public RFAFlagCubeBase, public RFDataMapper
      68             : {
      69             : public:
      70             :   RFASpectralRej  ( RFChunkStats &ch,const casacore::RecordInterface &parm ); 
      71           0 :   virtual ~RFASpectralRej () {};
      72             :   
      73           0 :   virtual casacore::uInt estimateMemoryUse () { return RFAFlagCubeBase::estimateMemoryUse()+2; }
      74             :   virtual casacore::Bool newChunk (casacore::Int &maxmem);
      75             :   virtual void endChunk ();
      76             :   virtual void startData (bool verbose);
      77             :   virtual IterMode iterTime (casacore::uInt it);
      78             :   virtual IterMode iterRow  (casacore::uInt ir);
      79             :   virtual IterMode endData  ();
      80             : 
      81             :   virtual casacore::String getDesc ();
      82             :   static const casacore::RecordInterface & getDefaults ();
      83             :   
      84             : protected:
      85             :   void addSegment  ( casacore::Int spwid,casacore::Double fq0,casacore::Double fq1,casacore::Int ch0,casacore::Int ch1 );
      86             :   void parseRegion ( const casacore::RecordInterface &parm );
      87             :     
      88             :   // spectral region specifications
      89             :   typedef struct Segment { casacore::Int spwid; casacore::Double fq0,fq1; casacore::Int ch0,ch1; } Segment;
      90             :   
      91             :   casacore::Block<Segment> segments;
      92             :   casacore::LogicalVector fitchan;
      93             :   casacore::uInt num_fitchan;
      94             : 
      95             :   casacore::uInt       ndeg,halfwin;
      96             :   casacore::Double     threshold;  
      97             :   
      98             :   RFRowClipper rowclipper; // row clipper object
      99             : 
     100             :   casacore::Polynomial<casacore::AutoDiff<casacore::Float> > poly; // fitted polynomial
     101             :   casacore::LinearFit<casacore::Float> fitter;     // fitter object
     102             :   
     103             :   casacore::Double     xnorm;
     104             : };
     105             : 
     106             : 
     107             : } //# NAMESPACE CASA - END
     108             : 
     109             : #endif