#include <ImageTask.h>

Inheritance diagram for casacore::ArrayLattice< T >:

Public Member Functions
	ArrayLattice ()
	The default constructor creates a ArrayLattice that is useless for just about everything, except that it can be assigned to with the assignment operator. More...

	ArrayLattice (const IPosition &shape)
	Construct an ArrayLattice with the specified shape. More...

	ArrayLattice (Array< T > &array, Bool isWritable=True)
	Construct an ArrayLattice that references the given Array. More...

	ArrayLattice (const Array< T > &array)
	Construct an ArrayLattice that references the given Array. More...

	ArrayLattice (const ArrayLattice< T > &other)
	The copy constructor uses reference semantics. More...

virtual	~ArrayLattice ()

ArrayLattice< T > &	operator= (const ArrayLattice< T > &other)
	The assignment operator uses copy semantics. More...

virtual Lattice< T > *	clone () const
	Make a copy of the object (reference semantics). More...

virtual Bool	canReferenceArray () const
	The lattice data can be referenced as an array section. More...

virtual Bool	isWritable () const
	Is the lattice writable? More...

virtual IPosition	shape () const
	returns the shape of the ArrayLattice. More...

virtual void	set (const T &value)
	Set all of the elements in the Lattice to a value. More...

Array< T > &	asArray ()
	Return the Array of the data within this Lattice. More...

const Array< T > &	asArray () const

virtual T	getAt (const IPosition &where) const
	Return the value of the single element located at the argument IPosition. More...

virtual void	putAt (const T &value, const IPosition &where)
	Put the value of a single element. More...

virtual Bool	ok () const
	Check for internal consistency. More...

virtual uInt	advisedMaxPixels () const
	Returns the maximum recommended number of pixels for a cursor. More...

void	getIterSlice (Array< T > &buffer, const IPosition &start, const IPosition &end, const IPosition &incr)
	Get a slice in an optimized way (specifically for ArrLatticeIter). More...

Public Member Functions inherited from casacore::Lattice< T >
virtual	~Lattice ()
	a virtual destructor is needed so that it will use the actual destructor in the derived class More...

virtual DataType	dataType () const
	Get the data type of the lattice. More...

T	operator() (const IPosition &where) const
	Return the value of the single element located at the argument IPosition. More...

Bool	get (COWPtr< Array< T > > &buffer, Bool removeDegenerateAxes=False) const
	Functions which extract an Array of values from a Lattice. More...

Bool	getSlice (COWPtr< Array< T > > &buffer, const Slicer &section, Bool removeDegenerateAxes=False) const

Bool	getSlice (COWPtr< Array< T > > &buffer, const IPosition &start, const IPosition &shape, Bool removeDegenerateAxes=False) const

Bool	getSlice (COWPtr< Array< T > > &buffer, const IPosition &start, const IPosition &shape, const IPosition &stride, Bool removeDegenerateAxes=False) const

Bool	get (Array< T > &buffer, Bool removeDegenerateAxes=False)

Bool	getSlice (Array< T > &buffer, const Slicer &section, Bool removeDegenerateAxes=False)

Bool	getSlice (Array< T > &buffer, const IPosition &start, const IPosition &shape, Bool removeDegenerateAxes=False)

Bool	getSlice (Array< T > &buffer, const IPosition &start, const IPosition &shape, const IPosition &stride, Bool removeDegenerateAxes=False)

Array< T >	get (Bool removeDegenerateAxes=False) const

Array< T >	getSlice (const Slicer &section, Bool removeDegenerateAxes=False) const

Array< T >	getSlice (const IPosition &start, const IPosition &shape, Bool removeDegenerateAxes=False) const

Array< T >	getSlice (const IPosition &start, const IPosition &shape, const IPosition &stride, Bool removeDegenerateAxes=False) const

void	putSlice (const Array< T > &sourceBuffer, const IPosition &where, const IPosition &stride)
	A function which places an Array of values within this instance of the Lattice at the location specified by the IPosition "where", incrementing by "stride". More...

void	putSlice (const Array< T > &sourceBuffer, const IPosition &where)

void	put (const Array< T > &sourceBuffer)

virtual void	apply (T(*function)(T))
	Replace every element, x, of the Lattice with the result of f(x). More...

virtual void	apply (T(*function)(const T &))

virtual void	apply (const Functional< T, T > &function)

void	operator+= (const Lattice< T > &other)
	Add, subtract, multiple, or divide by another Lattice. More...

void	operator-= (const Lattice< T > &other)

void	operator*= (const Lattice< T > &other)

void	operator/= (const Lattice< T > &other)

virtual void	copyData (const Lattice< T > &from)
	Copy the data from the given lattice to this one. More...

virtual void	copyDataTo (Lattice< T > &to) const
	Copy the data from this lattice to the given lattice. More...

virtual LatticeIterInterface< T > *	makeIter (const LatticeNavigator &navigator, Bool useRef) const
	These functions are used by the LatticeIterator class to generate an iterator of the correct type for a specified Lattice. More...

Public Member Functions inherited from casacore::LatticeBase
virtual	~LatticeBase ()
	A virtual destructor is needed so that it will use the actual destructor in the derived class. More...

virtual String	imageType () const
	Get the image type (returns name of derived class). More...

virtual Bool	isPersistent () const
	Is the lattice persistent and can it be loaded by other processes as well? That is the case for a PagedArray or PagedImage and for an ImageExpr which does not use transient lattices or regions. More...

virtual Bool	isPaged () const
	Is the lattice paged to disk? The default implementation returns False. More...

virtual void	save (const String &fileName) const
	Save the image in an AipsIO file with the given name. More...

virtual Bool	lock (FileLocker::LockType, uInt nattempts)
	It is strongly recommended to use class LatticeLocker to handle lattice locking. More...

virtual void	unlock ()

virtual Bool	hasLock (FileLocker::LockType) const

virtual void	resync ()
	Resynchronize the Lattice object with the lattice file. More...

virtual void	flush ()
	Flush the data (but do not unlock). More...

virtual void	tempClose ()
	Temporarily close the lattice. More...

virtual void	reopen ()
	Explicitly reopen the temporarily closed lattice. More...

virtual String	name (Bool stripPath=False) const
	Return the name of the current Lattice object. More...

virtual uInt	ndim () const
	Return the number of axes in this Lattice. More...

virtual size_t	nelements () const
	Return the total number of elements in this Lattice. More...

size_t	size () const

Bool	conform (const LatticeBase &other) const
	Return a value of "True" if this instance of Lattice and 'other' have the same shape, otherwise returns a value of "False". More...

virtual LELCoordinates	lelCoordinates () const
	Return the coordinates of the lattice. More...

IPosition	niceCursorShape (uInt maxPixels) const
	Returns a recommended cursor shape for iterating through all the pixels in the Lattice. More...

IPosition	niceCursorShape () const

virtual IPosition	doNiceCursorShape (uInt maxPixels) const
	The function (in the derived classes) doing the actual work. More...

virtual uInt	maximumCacheSize () const
	Maximum cache size - not necessarily all used. More...

virtual void	setMaximumCacheSize (uInt howManyPixels)
	Set the maximum (allowed) cache size as indicated. More...

virtual void	setCacheSizeInTiles (uInt howManyTiles)
	Set the actual cache size for this Array to be big enough for the indicated number of tiles. More...

virtual void	setCacheSizeFromPath (const IPosition &sliceShape, const IPosition &windowStart, const IPosition &windowLength, const IPosition &axisPath)
	Set the cache size as to "fit" the indicated path. More...

virtual void	clearCache ()
	Clears and frees up the caches, but the maximum allowed cache size is unchanged from when setCacheSize was called. More...

virtual void	showCacheStatistics (ostream &os) const
	Report on cache success. More...

Protected Member Functions
virtual Bool	doGetSlice (Array< T > &buffer, const Slicer &section)
	Do the actual getting of an array of values. More...

virtual void	doPutSlice (const Array< T > &sourceBuffer, const IPosition &where, const IPosition &stride)
	Do the actual putting of an array of values. More...

Protected Member Functions inherited from casacore::Lattice< T >
	Lattice ()
	Define default constructor to satisfy compiler. More...

virtual void	handleMath (const Lattice< T > &from, int oper)
	Handle the Math operators (+=, -=, *=, /=). More...

virtual void	handleMathTo (Lattice< T > &to, int oper) const

	Lattice (const Lattice< T > &)
	Copy constructor and assignment can only be used by derived classes. More...

Lattice< T > &	operator= (const Lattice< T > &)

template<>
void	handleMathTo (Lattice< Bool > &, int) const

Protected Member Functions inherited from casacore::LatticeBase
	LatticeBase ()
	Define default constructor to be used by derived classes. More...

	LatticeBase (const LatticeBase &)
	Copy constructor and assignment can only be used by derived classes. More...

LatticeBase &	operator= (const LatticeBase &)

void	throwBoolMath () const
	Throw an exception for arithmetic on a Bool Lattice. More...

Private Attributes
Array< T >	itsData

Bool	itsWritable

Detailed Description

template<class T>
class casacore::ArrayLattice< T >

A memory resident Lattice.

Intended use:

Public interface

Review Status

Reviewed By:: Peter Barnes
Date Reviewed:: 1999/10/30
Test programs:: tArrayLattice

Prerequisite

Etymology

The ArrayLattice name reflects its role as a Lattice interface to an Array object.

Synopsis

An ArrayLattice is a concrete Lattice class where the data is stored in memory as opposed to the PagedArray class where the data is stored on disk. As a result this class is much more suitable to problems which require small Lattices that can fit into the memory of a computer.

ArrayLattice imposes another layer of function calls on top of a an Array. As a result they should not be used for generic Array manipulation. They are useful if you have an Array that needs to use Lattice functions or needs to be used with PagedArrays or other Lattice derivatives (like LatticeExpr or SubLattice). For example the LatticeIterator class can iterate through an Array in more ways than any of the ArrayIterator classes can. The examples below illustrate some uses for ArrayLattices.

Example

All the examples in this section are available in dArrayLattice.cc

Example 1:

In this example an Array of data is converted into an ArrayLattice so that the copyData function can be used to write the data to a PagedArray which will be stored on disk.

// make an Array and fill it with data.
Array<Float> myArray(IPosition(3, 64, 64, 2));
indgen(myArray); // fills the Array with 0,1,2,....,64*64*2-1
// construct the ArrayLattice
ArrayLattice<Float> myLattice(myArray);
// make a PagedArray to store the data on disk
PagedArray<Float> myPagedArray(myLattice.shape(), "myTestData.array");
// now copy the data onto disk
myPagedArray.copyData (myLattice);

Note that it could be done in a somewhat simpler way as:

// make an Array and fill it with data.
Array<Float> myArray(IPosition(3, 64, 64, 2));
indgen(myArray); // fills the Array with 0,1,2,....,64*64*2-1
// make a PagedArray to store the data on disk
PagedArray<Float> myPagedArray(myLattice.shape(), "myTestData.array");
// now put the data onto disk
myPagedArray.put (myArray);

Example 2:

The ArrayIterator class (or its derivatives the VectorIterator and the MatrixIterator classes) do not allow the user to specify a cursor shape. In this example a Cube class will be converted into an ArrayLattice so that an ArrLatticeIter can be used to access the data spectrum by spectrum (assuming the z-axis is frequency).

Cube<Float> arr(64,64,128);
// assume that the data gets put into the cube somehow
// now construct an ArrayLattice from this cube.
ArrayLattice<Float> lat(arr);
// Construct an iterator that returns the 128-element spectra one at a time
ArrLatticeIter<Float> iter(lat, IPosition(3,1,1,128));
// construct a Matrix to hold the results
Matrix<Float> channelSum(64,64);
// and do the summation one spectrum at a time
for (iter.reset(); !iter.atEnd(); iter++)
channelSum(iter.position().getFirst(2)) = sum(iter.cursor());

There are more examples in the Lattice class and many of the examples in the PagedArray class will also be instructive.

Motivation

We needed a way of creating Lattices but with Casacore Array characteristics.

Definition at line 16 of file ImageTask.h.

Constructor & Destructor Documentation

template<class T>

casacore::ArrayLattice< T >::ArrayLattice ( )

The default constructor creates a ArrayLattice that is useless for just about everything, except that it can be assigned to with the assignment operator.

template<class T>

casacore::ArrayLattice< T >::ArrayLattice ( const IPosition & shape )

explicit

Construct an ArrayLattice with the specified shape.

It results in a writable lattice.

template<class T>

casacore::ArrayLattice< T >::ArrayLattice	(	Array< T > &	array,
		Bool	isWritable = `True`
	)

Construct an ArrayLattice that references the given Array.

By default it results in a writable lattice.

template<class T>

casacore::ArrayLattice< T >::ArrayLattice ( const Array< T > & array )

Construct an ArrayLattice that references the given Array.

It results in a non-writable lattice.

template<class T>

casacore::ArrayLattice< T >::ArrayLattice ( const ArrayLattice< T > & other )

The copy constructor uses reference semantics.

template<class T>

virtual casacore::ArrayLattice< T >::~ArrayLattice ( )

virtual

Member Function Documentation

template<class T>

virtual uInt casacore::ArrayLattice< T >::advisedMaxPixels ( ) const

virtual

Returns the maximum recommended number of pixels for a cursor.

For this class this is equal to the number of pixels in the lattice.

Reimplemented from casacore::Lattice< T >.

template<class T>

Array<T>& casacore::ArrayLattice< T >::asArray ( )

Return the Array of the data within this Lattice.

template<class T>

const Array<T>& casacore::ArrayLattice< T >::asArray ( ) const

template<class T>

virtual Bool casacore::ArrayLattice< T >::canReferenceArray ( ) const

virtual

The lattice data can be referenced as an array section.

Reimplemented from casacore::LatticeBase.

template<class T>

virtual Lattice<T>* casacore::ArrayLattice< T >::clone ( ) const

virtual

Make a copy of the object (reference semantics).

Implements casacore::Lattice< T >.

template<class T>

virtual Bool casacore::ArrayLattice< T >::doGetSlice	(	Array< T > &	buffer,
		const Slicer &	section
	)

protectedvirtual

Do the actual getting of an array of values.

Implements casacore::Lattice< T >.

template<class T>

virtual void casacore::ArrayLattice< T >::doPutSlice	(	const Array< T > &	sourceBuffer,
		const IPosition &	where,
		const IPosition &	stride
	)

protectedvirtual

Do the actual putting of an array of values.

Implements casacore::Lattice< T >.

template<class T>

virtual T casacore::ArrayLattice< T >::getAt ( const IPosition & where ) const

virtual

Return the value of the single element located at the argument IPosition.

Note that operator() (defined in the base class) can also be used.

Reimplemented from casacore::Lattice< T >.

template<class T>

void casacore::ArrayLattice< T >::getIterSlice	(	Array< T > &	buffer,
		const IPosition &	start,
		const IPosition &	end,
		const IPosition &	incr
	)

Get a slice in an optimized way (specifically for ArrLatticeIter).

It returns in buffer a reference to the lattice array.

template<class T>

virtual Bool casacore::ArrayLattice< T >::isWritable ( ) const

virtual

Is the lattice writable?

Reimplemented from casacore::LatticeBase.

template<class T>

virtual Bool casacore::ArrayLattice< T >::ok ( ) const

virtual

Check for internal consistency.

Returns False if something nasty has happened to the ArrayLattice.

Reimplemented from casacore::LatticeBase.

template<class T>

ArrayLattice<T>& casacore::ArrayLattice< T >::operator= ( const ArrayLattice< T > & other )

The assignment operator uses copy semantics.

template<class T>

virtual void casacore::ArrayLattice< T >::putAt	(	const T &	value,
		const IPosition &	where
	)

virtual

Put the value of a single element.

Reimplemented from casacore::Lattice< T >.

template<class T>

virtual void casacore::ArrayLattice< T >::set ( const T & value )

virtual

Set all of the elements in the Lattice to a value.

Reimplemented from casacore::Lattice< T >.

template<class T>

virtual IPosition casacore::ArrayLattice< T >::shape ( ) const

virtual

returns the shape of the ArrayLattice.

Implements casacore::LatticeBase.

Member Data Documentation

template<class T>

Array<T> casacore::ArrayLattice< T >::itsData

private

Definition at line 230 of file ArrayLattice.h.

template<class T>

Bool casacore::ArrayLattice< T >::itsWritable

private

Definition at line 231 of file ArrayLattice.h.

The documentation for this class was generated from the following files:

casa/code/imageanalysis/ImageAnalysis/ImageTask.h
casa/casacore/lattices/Lattices/ArrayLattice.h

Public Member Functions

Protected Member Functions

Private Attributes

Detailed Description

template<class T> class casacore::ArrayLattice< T >

Intended use:

Review Status

Prerequisite

Etymology

Synopsis

Example

Example 1:

Example 2:

Motivation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<class T>
class casacore::ArrayLattice< T >