casa
5.7.0-16
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#include <ImageMomentsTask.h>
Public Member Functions | |
ImageMomentsTask ()=delete | |
Top level interface for creating image moments. More... | |
ImageMomentsTask (const SPCIIT image, const casacore::Record *const region, const casacore::String &mask, const casacore::String &smoothImageName, casacore::Bool overwrite) | |
overwrite only applies to the smooth image. More... | |
~ImageMomentsTask () | |
casacore::String | getClass () const |
SPIIT | makeMoments () const |
the first requested moments image is returned. More... | |
void | setAxis (casacore::Int axis) |
set moments axis number More... | |
void | setIncludeExcludeRange (const std::vector< T > &range, casacore::Bool isInclude) |
set the include or exclude range. More... | |
void | setKernels (const std::vector< casacore::String > &kernels) |
Set smoothing kernels. More... | |
void | setKernelWidths (const std::vector< casacore::Quantity > &kernelWidths) |
set smoothing kernel widths More... | |
void | setMethods (const std::vector< casacore::String > &methods) |
set moment methods More... | |
void | setMoments (const casacore::Vector< casacore::Int > &moments) |
set moments to compute More... | |
void | setMomentsProgressMonitor (ImageMomentsProgressMonitor *progressMonitor) |
void | setMomentImageName (const casacore::String &name) |
set the base name for the moment images. More... | |
void | setRemoveAxis (casacore::Bool remove) |
Should the moment axis be removed. More... | |
void | setSmoothAxes (const std::vector< casacore::uInt > &axes) |
set smoothing axes More... | |
void | setSNR (casacore::Double snr) |
set desired signal-to-noise. More... | |
void | setStdDev (casacore::Double stddev) |
set desired standard deviation. More... | |
void | setVelocityType (const casacore::String &type) |
set the velocity type. More... | |
Public Member Functions inherited from casa::ImageTask< T > | |
virtual | ~ImageTask () |
void | setStretch (const casacore::Bool stretch) |
void | setLogfile (const casacore::String &lf) |
tacitly does nothing if lf is the empty string. More... | |
void | setLogfileAppend (const casacore::Bool a) |
void | setRegion (const casacore::Record ®ion) |
void | setMask (const casacore::String &mask) |
void | setVerbosity (Verbosity verbosity) |
void | addHistory (const std::vector< std::pair< casacore::String, casacore::String > > &msgs) const |
These messages will appear in the product image history upon the call to _prepareOutputImage(). More... | |
void | addHistory (const casacore::LogOrigin &origin, const casacore::String &msg) const |
void | addHistory (const casacore::LogOrigin &origin, const std::vector< casacore::String > &msgs) const |
void | addHistory (const casacore::LogOrigin &origin, const casacore::String &taskname, const std::vector< casacore::String > ¶mNames, const std::vector< casac::variant > ¶mValues) const |
This adds standard history messages regarding the task that was run and input parameters used. More... | |
void | suppressHistoryWriting (casacore::Bool b) |
suppress writing the history on _prepareOutputImage() call. More... | |
std::vector< std::pair < casacore::String, casacore::String > > | getHistory () |
get the history associated with the task. More... | |
void | setDropDegen (casacore::Bool d) |
Protected Member Functions | |
CasacRegionManager::StokesControl | _getStokesControl () const |
std::vector < casacore::Coordinate::Type > | _getNecessaryCoordinates () const |
Represents the minimum set of coordinates necessary for the task to function. More... | |
casacore::Bool | _supportsMultipleBeams () const |
does this task support images with multiple beams? false means it never does. More... | |
casacore::Bool | _supportsMultipleRegions () const |
Protected Member Functions inherited from casa::ImageTask< T > | |
ImageTask (const SPCIIT image, const casacore::String ®ion, const casacore::Record *const ®ionPtr, const casacore::String &box, const casacore::String &chanInp, const casacore::String &stokes, const casacore::String &maskInp, const casacore::String &outname, casacore::Bool overwrite) | |
if outname is empty, no image will be written if overwrite is True, if image already exists it will be removed if overwrite is False, if image already exists exception will be thrown More... | |
ImageTask (const SPCIIT image, const casacore::Record *const ®ionPtr, const casacore::String &mask, const casacore::String &outname, casacore::Bool overwrite) | |
virtual std::vector < OutputDestinationChecker::OutputStruct > | _getOutputStruct () |
virtual void | _construct (casacore::Bool verbose=true) |
does the lion's share of constructing the object, ie checks validity of inputs, etc. More... | |
const SPCIIT | _getImage () const |
const casacore::String & | _getMask () const |
const casacore::Record * | _getRegion () const |
void | _setStokes (const casacore::String &stokes) |
const casacore::String & | _getStokes () const |
const casacore::String & | _getChans () const |
const casacore::String & | _getOutname () const |
casacore::Bool | _isPVImage () const |
Is the attached image a position-velocity (PV) image? More... | |
void | _removeExistingOutfileIfNecessary () const |
void | _removeExistingFileIfNecessary (const casacore::String &filename, const casacore::Bool overwrite, casacore::Bool warnOnly=false) const |
if warnOnly is true, log a warning message if file exists and overwrite is true, else throw an exception. More... | |
casacore::String | _summaryHeader () const |
const std::shared_ptr < casacore::LogIO > | _getLog () const |
virtual casacore::Bool | _hasLogfileSupport () const |
by default, derived classes are configured to have no log file support. More... | |
casacore::Bool | _getStretch () const |
Bool | _getSuppressHistory () const |
const std::shared_ptr< LogFile > | _getLogFile () const |
casacore::Bool | _writeLogfile (const casacore::String &output, const casacore::Bool open=true, const casacore::Bool close=true) |
casacore::Bool | _openLogfile () |
void | _closeLogfile () const |
SPIIT | _prepareOutputImage (const casacore::ImageInterface< T > &image, const casacore::Array< T > *const values, const casacore::ArrayLattice< casacore::Bool > *const mask=nullptr, const casacore::IPosition *const outShape=nullptr, const casacore::CoordinateSystem *const coordsys=nullptr, const casacore::String *const outname=nullptr, casacore::Bool overwrite=false, casacore::Bool dropDegen=false) const |
If outname != NULL, use the value supplied. More... | |
SPIIT | _prepareOutputImage (const casacore::ImageInterface< T > &image, casacore::Bool dropDegen=false) const |
SPIIT | _prepareOutputImage (const casacore::ImageInterface< T > &image, const casacore::String &outname, casacore::Bool overwrite, casacore::Bool warnOnly) const |
if warnOnly is true, only log a warning message if the file exists and overwrite is true, else throw an excepction More... | |
SPIIT | _prepareOutputImage (const casacore::ImageInterface< T > &image, const casacore::Lattice< T > &data) const |
data are copied to the output image from the data lattice. More... | |
Verbosity | _getVerbosity () const |
casacore::Bool | _getOverwrite () const |
virtual casacore::Bool | _mustHaveSquareDirectionPixels () const |
casacore::Bool | _getDropDegen () const |
template<class U > | |
void | _doHistory (std::shared_ptr< casacore::ImageInterface< U >> &image) const |
void | _reportOldNewImageShapes (const ImageInterface< T > &out) const |
void | _reportOldNewImageShapes (const IPosition &outShape) const |
Private Member Functions | |
void | _deleteTempImage (const casacore::String &tmpImage) const |
Private Attributes | |
casacore::Vector< casacore::Int > | _moments |
casacore::Int | _axis |
std::vector< casacore::String > | _methods |
std::vector< casacore::String > | _kernels |
std::vector< casacore::uInt > | _smoothAxes |
std::vector< casacore::Quantity > | _kernelWidths |
std::vector< T > | _range |
casacore::Bool | _isIncludeRange |
casacore::Bool | _removeAxis |
casacore::Double | _snr |
casacore::Double | _stddev |
casacore::String | _velocityType |
casacore::String | _momentName |
ImageMomentsProgressMonitor * | _imageMomentsProgressMonitor |
Additional Inherited Members | |
Public Types inherited from casa::ImageTask< T > | |
enum | Verbosity { QUIET, WHISPER, LOW, NORMAL, HIGH, NOISY, DEAFENING } |
Virtual base class for image analysis tasks. More... | |
Static Protected Member Functions inherited from casa::ImageTask< T > | |
static void | _copyMask (casacore::Lattice< casacore::Bool > &mask, const casacore::ImageInterface< T > &image) |
static void | _copyData (casacore::Lattice< T > &data, const casacore::Lattice< T > &image) |
Definition at line 12 of file ImageMomentsTask.h.
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delete |
casa::ImageMomentsTask< T >::ImageMomentsTask | ( | const SPCIIT | image, |
const casacore::Record *const | region, | ||
const casacore::String & | mask, | ||
const casacore::String & | smoothImageName, | ||
casacore::Bool | overwrite | ||
) |
overwrite only applies to the smooth image.
The moment images should be removed if they exist.
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Definition at line 43 of file ImageMomentsTask.h.
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Represents the minimum set of coordinates necessary for the task to function.
Implements casa::ImageTask< T >.
Definition at line 109 of file ImageMomentsTask.h.
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inlineprotectedvirtual |
Implements casa::ImageTask< T >.
Definition at line 105 of file ImageMomentsTask.h.
References casa::CasacRegionManager::USE_ALL_STOKES.
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inlineprotectedvirtual |
does this task support images with multiple beams? false means it never does.
true means it does, but not necessarily in all cases (in which case, the derived class is responsible for checking for and throwing exceptions in those cases).
Reimplemented from casa::ImageTask< T >.
Definition at line 113 of file ImageMomentsTask.h.
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inlineprotectedvirtual |
Reimplemented from casa::ImageTask< T >.
Definition at line 115 of file ImageMomentsTask.h.
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inlinevirtual |
Implements casa::ImageTask< T >.
Definition at line 45 of file ImageMomentsTask.h.
SPIIT casa::ImageMomentsTask< T >::makeMoments | ( | ) | const |
the first requested moments image is returned.
void casa::ImageMomentsTask< T >::setAxis | ( | casacore::Int | axis | ) |
set moments axis number
void casa::ImageMomentsTask< T >::setIncludeExcludeRange | ( | const std::vector< T > & | range, |
casacore::Bool | isInclude | ||
) |
set the include or exclude range.
An empty vector means no range is set, a one element vector means -range[0] to range[0] is set. If the vector contains more than two elements, an exception is thrown. If isInclude is true, then the range is the range to be included, excluded if false.
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Set smoothing kernels.
Definition at line 60 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_kernels.
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set smoothing kernel widths
Definition at line 63 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_kernelWidths.
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set moment methods
Definition at line 68 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_methods.
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set the base name for the moment images.
Definition at line 78 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_momentName, and casa::name().
void casa::ImageMomentsTask< T >::setMoments | ( | const casacore::Vector< casacore::Int > & | moments | ) |
set moments to compute
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Definition at line 73 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_imageMomentsProgressMonitor.
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Should the moment axis be removed.
These rules will be followed: If the moment axis is associated with a coordinate with one axis only, the axis and its coordinate are physically removed from the output image. Otherwise, if remove=true
then the output axis is logically removed from the the output CoordinateSystem. If remove=false
then the axis is retained with shape=1 and with its original coordinate information (which is probably meaningless).
Definition at line 87 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_removeAxis.
void casa::ImageMomentsTask< T >::setSmoothAxes | ( | const std::vector< casacore::uInt > & | axes | ) |
set smoothing axes
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set desired signal-to-noise.
Less than or equal to zero means use the default value.
Definition at line 94 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_snr.
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set desired standard deviation.
Less than or equal to zero means set to 0.
Definition at line 98 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_stddev, and casacore::stddev().
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set the velocity type.
Definition at line 101 of file ImageMomentsTask.h.
References casa::ImageMomentsTask< T >::_velocityType, and casa::type().
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Definition at line 119 of file ImageMomentsTask.h.
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Definition at line 127 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setMomentsProgressMonitor().
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Definition at line 124 of file ImageMomentsTask.h.
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Definition at line 120 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setKernels().
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Definition at line 122 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setKernelWidths().
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Definition at line 120 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setMethods().
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Definition at line 126 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setMomentImageName().
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Definition at line 118 of file ImageMomentsTask.h.
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Definition at line 123 of file ImageMomentsTask.h.
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Definition at line 124 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setRemoveAxis().
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Definition at line 121 of file ImageMomentsTask.h.
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Definition at line 125 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setSNR().
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Definition at line 125 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setStdDev().
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Definition at line 126 of file ImageMomentsTask.h.
Referenced by casa::ImageMomentsTask< T >::setVelocityType().